|
January
|
|
January 21
|
|
|
January 28
|
Dr. Mauro Mobilia
(Virginia Tech)
Exact results for some non-equilibrium many-body systems
In this seminar, I will discuss exact results obtained for some
non-equilibrium many-body systems, with special emphasis on dynamics in low
dimensions where fluctuations are crucial. I will first review the so-called
"stochastic Hamiltonian formalism" and mention some solution methods. As an
illustration of the fermion field-theoretical approach, I will then discuss in
some details the one-dimensional A+A ↔ 0 + 0 diffusion-limited reaction,
which is completely solvable. Alternative solution techniques will also be
commented on. Then, I will illustrate an approach allowing to deal with some
stochastic many-body systems in arbitrary dimensions and in the presence of
inhomogeneities: I will describe the solution of a paradigmatic kinetic spin
system, namely an inhomogeneous version of the "voter model". Finally, some
possible future lines of research will be outlined.
|
|
February
|
|
February 4
|
|
|
February 11
|
|
|
February 18
|
|
|
February 25
|
|
|
March
|
|
March 3
|
|
|
March 10
|
Spring Break |
|
March 17
|
Dr. Manoj Gopalakrishnan
(Virginia Tech)
Impact of lipid rafts on cell signaling: co-operative behavior in a
sub-cellular process
We study how lipid raft-induced clustering of receptor proteins on the cell
surface leads to longer association of ligands, thereby boosting the chemical
signal. We show analytically that, even with a homogeneous distribution of
receptors, rebinding considerably slows down the release of ligands over long
times (power-law replacing exponential). This effect is enhanced in the
presence of lipid rafts, where numerical simulations show that the surface
diffusion of bound ligands inside a raft plays a crucial role. We compare our
results to current and past experimental studies.
|
|
March 24
|
APS March Meeting |
|
March 31
|
Dr. Steven Mitchell
(University of Virginia, Charlottesville, VA)
Halide adsorption, fundamental studies in electrochemistry
At the atomic and molecular level, very little is understood about basic
electrochemical adsorption processes. The subject, in general, can be
classified as a surface science problem with chemical or electrochemical
potential control, but unlike vacuum systems, the electrochemical environment
is quite complex, containing water molecules, ions, and possibly surface
charges. Many problems of industrial or applied interest depend on a
fundamental understanding of electrochemical adsorption processes, although
very little is actually known about such systems. Examples of applied problems
include fuel cells, catalysis of environmental pollutants, electroplating, and
neurochemistry, particularly synaptic function. We begin to understand the
fundamental issues of the field by studying chemically simple adsorption
problems, like halide adsorption on single crystal surfaces. Because of the
complexity of even the simplest electrochemical systems, a wide variety of
simulation methods must be used, ranging from simple lattice-gas models to DFT
calculations and more complex off-lattice models, and we vigorously encourage
quantitative comparison with experiments.
|
|
April
|
|
April 7
|
Dr. Mauro Mobilia
(Virginia Tech)
Complete solution for the kinetics of a far-from-equilibrium spin chain
The complete solution of the kinetic one-dimensional nonequilibrium Ising
model, as first introduced by Racz and Zia, and whose exact stationary
properties have been recently studied by Schmittmann and Schmüser, is
presented. The genuine far-from-equilibrium many-body problem under
consideration (detailed balance is violated) is an Ising-like model evolving
according to a generalization of Glauber spin flip rates, where spins at even
and odd lattice sites are coupled to heat baths with different effective
temperatures. In this seminar, we show how it has been possible to compute the
dynamical magnetization and all correlation functions of this model. We
then explain how these quantities provide the full time-dependent probability
distribution function of the system through a Wick theorem involving three
different kinds of spin-spin correlation functions. Finally, we also mention
the duality of this spin system with a pair-annihilation and pair-creation
reaction-diffusion model through a domain-wall mapping.
|
|
April 14
|
|
|
April 21
|
Professor Dr. Eckehard Schöll
(Technical University of Berlin, Germany)
Controlling noise-induced motion by time-delayed feedback
We consider nonlinear dynamic systems under the influence of noise. Time
delayed feedback control that was earlier introduced for the purpose of control
of deterministic chaotic oscillations in nonlinear dynamic systems, is
exploited for controlling noise-induced motion modelled by stochastic
differential equations. Such noise-induced oscillations are widespread in
systems near bifurcations, and in excitable systems like neurons, semiconductor
nanostructures, or chemical reaction systems. Under appropriate choice of time
delay, one can either increase or decrease the regularity of motion. In an
excitable system, delayed feedback stabilizes the frequency of oscillations
against variation of noise strength. Also, for fixed noise intensity, the
phenomenon of entrainment of basic periods of oscillations by the delayed
feedback is found. This allows one to steer the timescales of noise-induced
motion by changing the time delay.
|
|
April 28
|
Professor Dr. Alexey Onufriev
(Department of Computer Science, Virginia Tech)
Computational methods in molecular biophysics
Molecular interactions are the basis of life, understanding their intricate
details is critical to progress in many areas of the life sciences. However,
current experimental methods alone do not provide us with complete picture of
what is going on at this microscopic level (mainly because the objects involved
are too complex and their parts move too fast), and this is where computer
modeling can make a difference. My research focuses on development of novel
physics-based computational methodologies and applying them to biomolecular
systems; in this talk I will give a brief overview of some of the recent
projects I have been working on. I will introduce the ``virtual water"
methodology and show how it can be successfully applied to the protein folding
problem; I will them describe my work on understanding the molecular mechanism
behind the proton-pumping function of the protein bacteriorhodopsin - the
smallest natural solar panel. Finally, I will show how simple physics can be
used to understand the molecular basis of stability of proteins from organisms
that survive under extreme conditions, e.g. halo-bacteria from the Dead Sea.
|
|
May
|
|
May 5
|
|