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January
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January 19
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Professor (em.) Dr. David De Wolf
(Virginia Tech Electrical and Computer Engineering Department)
Electromagnetic Signals in DNG Materials
As long ago as 1968, V.S.Veselago (Sov.Phys.-Uspekhi, 10, pp. 509-514, 1968)
showed that materials with EM parameters ε < 0 and μ < 0 have
surprisingly different properties from the more familiar EM media. Only since
2000 or so have artificial materials been made with such 'double-negative'
(DNG) properties. One interesting property is the ability of slabs of such
material to act as lenses with respect to essentially monochromatic signals.
Most peculiar, and perhaps debatable, is a property claimed by J. Pendry (J.B.
Pendry, Phys. Rev. Lett., 85, 3966-3969, 2000): 'perfect lensing' is possible
because a monochromatic point source (which necessarily produces evanescent
plane-wave components when incident upon a slab of properly-chosen DNG
material) will be perfectly imaged at a point upon emerging on the other side,
because the attenuation of the evanescent components is completely undone.
I will show that for any narrowband signal, even for transmission through very
narrow slabs, such attenuation is not undone, even if it is for purely
monochromatic waves.
My talk will include enough tutorial material to make it palatable to those who
are less familiar with this or related topics.
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January 26
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Professor Dr. Nancy Love
(Virginia Tech Civil and Environmental Engineering Department)
Dynamic Microbial Responses to Chemical Perturbations: An Attempt to
Understand Microbial Stress Across Scales
The fate of chemical toxins that move through the natural and built
environment is influenced significantly by the path the chemicals take. In many
cases, toxins become diluted sufficiently so that they are not present in
lethal concentrations, yet exposure to sub-lethal concentrations can still be
deleterious to ecological and human health. My laboratory has focused primarily
on understanding the impact of perturbations with chemical stressors on
wastewater treatment plants, facilities comprising part of the built
environment, by evaluating how molecular-scale phenomena induced by the
stressors manifest into destructive macroscale phenomena. Specifically, we have
hypothesized that physiological bacterial stress response mechanisms, which are
activated at the molecular level, are responsible for macroscale-activated
sludge process upsets caused by shock loads of toxic chemicals. We believe that
distinct microbial stress fingerprints can be identified and correlated to
different classes of chemicals, and that molecular-level stress responses are
significant causal mechanisms that lead to significant process effect problems.
As such, we have been working to understand the sourcecause-effect
relationships for chemical toxins entering these waste treatment facilities. We
are currently constructing a prototype microfluidic biosensor for application
in the wastewater treatment industry for early detection of toxic shock loads
based on outcomes from our sourcecause-effect studies. The basis behind the
sensor concepts are all related to microbial stress responses. My presentation
will provide a timeline of how we evaluated the impact of chemical stressors in
this complex environment, and how recent mass spectrometric data has opened a
new pathway toward solving the problem of detecting chemical perturbations in
the built and natural environment. I will also explain how some of the
bacterial stress responses we are studying are common between bacteria and
humans, and I will propose that bacteria can serve as a robust model for
detecting stress that is pertinent to a wide range of cellular types (including
mammalian cells).
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February
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February 2
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Professor Dr. Mark Paul
(Virginia Tech Department of Mechanical Engineering)
New physical insights from experimentally realistic numerical simulations: Spatiotemporal Chaos and BioNEMS
Laboratory experiments often do not meet the idealizations required by
available theory making it difficult to compare experimental results with
theoretical predictions. However, in many situations of engineering and
scientific interest, it is now possible with efficient parallel programs and/or
clever physically motivated numerical algorithms, to perform numerical
simulations for precise experimental conditions allowing the link between
theory and experiment to be made. We can gain new physical insights by
exploiting numerical advantages, such as, for example: the ability to modify
the physics in order to disentangle competing subtle effects, the capacity to
measure quantities inaccessible to experiment, and the ability to investigate
regimes beyond current experimental capabilities. In this talk this approach is
used to gain new physical insight into the two physically diverse examples of
spatiotemporal chaos in Rayleigh-Benard Convection and the stochastic Brownian
motion of nanoscale cantilevers immersed in a viscous fluid for use in
biofunctionalized nano-electro-mechanical-systems (BioNEMS) as a single
molecule detector.
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February 9
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February 16
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February 23
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Dr. Ed Lyman
(Center for Computational Biology and Bioinformatics, University of Pittsburgh, Pittsburgh, PA)
Sampling Protein Conformations by Resolution Exchange
Atomic resolution structures for many proteins are now available by a
variety of techniques. In solution, however, proteins adopt not one structure,
but an ensemble of conformations. Computational studies of this ensemble remain
beyond the reach of current computing resources, as many of the relevant
fluctuations occur on millisecond timescales. I will present a new simulation
protocol, called resolution exchange, which combines the detail of an all-atom
model, with the sampling efficiency of a reduced resolution representation.
Preliminary results will be presented for a pentapeptide neurotransmitter,
met-enkephalin.
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March
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March 2
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March 9
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Spring Break |
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March 16
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March 23
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APS March meeting |
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March 30
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April
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April 6
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April 13
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Special Seminar
TUESDAY April 19 3.30 p.m.
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Zhaomin Yang
(Virginia Tech Biology Department)
Remote Sensing by a Gliding Bacterium ?
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April 27
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May
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May 4
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Dr. Gunnar Pruessner
(Virginia Tech)
2D Percolation: Analytical Results, Numerical Methods, and Superscaling
I want to present a brief overview about the analytical results on 2D
percolation, especially within the last few years. After reviewing a novel
algorithm for simulating percolation on the computer for very large systems
with various boundary conditions and aspect ratios simultaneously, as well as
"histogram methods" for percolation, I want to discuss the recent suggestion of
the presence of "superscaling" in 2D percolation.
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